STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KGJ87915.1KEGG: OmpA/MotB protein. (211 aa)    
Predicted Functional Partners:
KGJ98559.1
Hypothetical protein; KEGG: WD-40-like beta propeller repeat-containing protein.
  
 0.890
tolB
Hypothetical protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.890
KGJ91066.1
KEGG: OmpH family outer membrane protein; Belongs to the skp family.
  
 
 0.823
lolA
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
 
 0.754
KGJ87916.1
Hypothetical protein.
       0.737
KGJ90759.1
KEGG: flagellar motor protein.
  
 0.709
KGJ91586.1
Hypothetical protein; KEGG: peptidase S8/S53 subtilisin kexin sedolisin.
  
 
 0.700
KGJ95757.1
Hypothetical protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.
   
 
 0.698
KGK00425.1
Hypothetical protein; KEGG: cinA, competence/damage-inducible protein CinA; Belongs to the CinA family.
    
  0.669
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.662
Your Current Organism:
Thalassotalea sp. ND16A
NCBI taxonomy Id: 1535422
Other names: T. sp. ND16A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.