STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JS80_08270Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)    
Predicted Functional Partners:
JS80_08265
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
  
 0.631
JS80_02030
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
birA
biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.510
JS80_06775
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.500
JS80_04555
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.487
JS80_03825
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.455
JS80_07235
Competence protein comGD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
JS80_07225
Competence protein comGF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
JS80_10515
Competence transcription factor (CTF); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
JS80_03725
Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
Your Current Organism:
Anoxybacillus sp. KU26
NCBI taxonomy Id: 1535751
Other names: A. sp. KU2-6(11), Anoxybacillus sp. KU2-6(11)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.