STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971395_01711Unannotated protein. (427 aa)    
Predicted Functional Partners:
GCA_000971395_01712
Unannotated protein.
       0.580
GCA_000971395_01713
Unannotated protein.
       0.579
GCA_000971395_01714
Unannotated protein.
       0.499
GCA_000971395_00003
Unannotated protein.
  
     0.418
GCA_000971395_01706
Unannotated protein.
 
    0.402
Your Current Organism:
Lysinimicrobium iriomotense
NCBI taxonomy Id: 1536641
Other names: DSM 28146, L. iriomotense, Lysinimicrobium iriomotense Hamada et al. 2015, Lysinimicrobium sp. HI12-143, Lysinimicrobium sp. NBRC 109399, NBRC 109399, strain HI12-143
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.