STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT05_04425Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
JT05_04435
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.978
JT05_04430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.977
JT05_04440
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
JT05_04475
ATP-dependent Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.945
JT05_00760
ATP-dependent Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.935
JT05_00750
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.930
JT05_00745
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
JT05_04470
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.835
JT05_00755
Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.800
JT05_02150
RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.538
Your Current Organism:
Desulfosporosinus sp. TolM
NCBI taxonomy Id: 1536651
Other names: D. sp. Tol-M, Desulfosporosinus sp. Tol-M
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