STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT05_06625Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa)    
Predicted Functional Partners:
JT05_06620
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.960
JT05_06640
Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
JT05_06635
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.941
JT05_06650
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.785
JT05_06630
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.774
JT05_12215
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.765
JT05_06645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.713
JT05_06615
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.704
JT05_04915
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.585
JT05_06655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
Your Current Organism:
Desulfosporosinus sp. TolM
NCBI taxonomy Id: 1536651
Other names: D. sp. Tol-M, Desulfosporosinus sp. Tol-M
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.