STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JT06_12875Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
JT06_10740
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.706
JT06_16490
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
JT06_14540
Gamma-glutamyl cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.618
JT06_13680
Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.616
JT06_10415
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
JT06_16840
Gamma-glutamyl cyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
JT06_16505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
JT06_11895
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.576
JT06_04040
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
cysS-2
cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.568
Your Current Organism:
Desulfobulbus sp. TolSR
NCBI taxonomy Id: 1536652
Other names: D. sp. Tol-SR, Desulfobulbus sp. Tol-SR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.