STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ34550.1N-acetyl-D-glucosamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
AIQ34549.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.908
AIQ34548.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.907
AIQ34536.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
AIQ37138.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
AIQ37543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.866
AIQ37170.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.865
AIQ37354.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.865
AIQ35125.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.863
AIQ37576.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.862
AIQ38490.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.862
Your Current Organism:
Paenibacillus sp. FSLR50345
NCBI taxonomy Id: 1536770
Other names: P. sp. FSL R5-0345, Paenibacillus sp. FSL R5-0345
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