STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ36898.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)    
Predicted Functional Partners:
AIQ36897.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.997
AIQ35706.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.909
AIQ33831.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.858
AIQ33846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.822
AIQ36549.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.820
AIQ38283.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.818
AIQ35707.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.806
AIQ37945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.805
AIQ35672.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.796
AIQ37405.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.796
Your Current Organism:
Paenibacillus sp. FSLR50345
NCBI taxonomy Id: 1536770
Other names: P. sp. FSL R5-0345, Paenibacillus sp. FSL R5-0345
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.