STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ50491.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)    
Predicted Functional Partners:
AIQ50492.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.844
AIQ50493.1
Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.820
AIQ50494.1
Sodium ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.820
AIQ50495.1
Potassium ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.820
AIQ50497.1
Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
AIQ50496.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.559
AIQ50486.1
Cytochrome B oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
AIQ50487.1
Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
AIQ50488.1
Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
AIQ50489.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.454
Your Current Organism:
Paenibacillus sp. FSLR70331
NCBI taxonomy Id: 1536773
Other names: P. sp. FSL R7-0331, Paenibacillus sp. FSL R7-0331
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