STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ50912.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)    
Predicted Functional Partners:
AIQ50913.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.783
AIQ51153.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.584
AIQ52015.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AIQ50911.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.459
AIQ50914.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.413
AIQ55401.1
Sporulation protein SpoOM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.406
Your Current Organism:
Paenibacillus sp. FSLR70331
NCBI taxonomy Id: 1536773
Other names: P. sp. FSL R7-0331, Paenibacillus sp. FSL R7-0331
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.