STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3EEU6Protein kinase domain-containing protein. (613 aa)    
Predicted Functional Partners:
I1HJT9_BRADI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.651
I1GSC7_BRADI
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.606
A0A2K2DIS8
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.600
I1IIS1_BRADI
RPOLD domain-containing protein.
   
 
 0.588
A0A0Q3QSG4
Uncharacterized protein; Belongs to the cyclin family.
    
 0.575
I1H0E7_BRADI
Uncharacterized protein; Belongs to the cyclin family.
    
 0.575
I1HIC6_BRADI
Uncharacterized protein; Belongs to the cyclin family.
    
 0.575
I1HWW9_BRADI
Uncharacterized protein; Belongs to the cyclin family.
    
 0.575
I1HZU4_BRADI
Uncharacterized protein; Belongs to the cyclin family.
    
 0.575
I1HWD6_BRADI
RPOL4c domain-containing protein.
    
 0.500
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.