A0A0Q3EK72 protein (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0Q3EK72

Uncharacterized protein. (1072 aa)

Predicted Functional Partners:

A0A0Q3H264

0.965

I1I676_BRADI

0.964

A0A0Q3K0W8

0.961

A0A0Q3KB77

0.958

A0A2K2D0M9

0.958

A0A2K2D687

0.958

A0A2K2DVP1

0.958

A0A0Q3F0Q7

0.957

I1HNE4_BRADI

0.928

A0A0Q3GFQ9

0.891

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3EK72	A0A0Q3F0Q7	A0A0Q3EK72	A0A0Q3F0Q7	Uncharacterized protein.	Protein kinase domain-containing protein.	0.957
A0A0Q3EK72	A0A0Q3GFQ9	A0A0Q3EK72	A0A0Q3GFQ9	Uncharacterized protein.	Uncharacterized protein.	0.891
A0A0Q3EK72	A0A0Q3H264	A0A0Q3EK72	A0A0Q3H264	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.965
A0A0Q3EK72	A0A0Q3K0W8	A0A0Q3EK72	A0A0Q3K0W8	Uncharacterized protein.	Piezo_RRas_bdg domain-containing protein.	0.961
A0A0Q3EK72	A0A0Q3KB77	A0A0Q3EK72	A0A0Q3KB77	Uncharacterized protein.	Uncharacterized protein.	0.958
A0A0Q3EK72	A0A2K2D0M9	A0A0Q3EK72	A0A2K2D0M9	Uncharacterized protein.	Rhodanese domain-containing protein.	0.958
A0A0Q3EK72	A0A2K2D687	A0A0Q3EK72	A0A2K2D687	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.958
A0A0Q3EK72	A0A2K2DVP1	A0A0Q3EK72	A0A2K2DVP1	Uncharacterized protein.	Rhodanese domain-containing protein.	0.958
A0A0Q3EK72	I1HNE4_BRADI	A0A0Q3EK72	I1HNE4	Uncharacterized protein.	DNA helicase; Belongs to the MCM family.	0.928
A0A0Q3EK72	I1I676_BRADI	A0A0Q3EK72	I1I676	Uncharacterized protein.	Protein kinase domain-containing protein.	0.964
A0A0Q3F0Q7	A0A0Q3EK72	A0A0Q3F0Q7	A0A0Q3EK72	Protein kinase domain-containing protein.	Uncharacterized protein.	0.957
A0A0Q3F0Q7	A0A0Q3H264	A0A0Q3F0Q7	A0A0Q3H264	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.710
A0A0Q3F0Q7	A0A0Q3KB77	A0A0Q3F0Q7	A0A0Q3KB77	Protein kinase domain-containing protein.	Uncharacterized protein.	0.506
A0A0Q3F0Q7	A0A2K2D0M9	A0A0Q3F0Q7	A0A2K2D0M9	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.915
A0A0Q3F0Q7	A0A2K2D687	A0A0Q3F0Q7	A0A2K2D687	Protein kinase domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.506
A0A0Q3F0Q7	A0A2K2DVP1	A0A0Q3F0Q7	A0A2K2DVP1	Protein kinase domain-containing protein.	Rhodanese domain-containing protein.	0.915
A0A0Q3F0Q7	I1HNE4_BRADI	A0A0Q3F0Q7	I1HNE4	Protein kinase domain-containing protein.	DNA helicase; Belongs to the MCM family.	0.423
A0A0Q3F0Q7	I1I676_BRADI	A0A0Q3F0Q7	I1I676	Protein kinase domain-containing protein.	Protein kinase domain-containing protein.	0.486
A0A0Q3GFQ9	A0A0Q3EK72	A0A0Q3GFQ9	A0A0Q3EK72	Uncharacterized protein.	Uncharacterized protein.	0.891
A0A0Q3GFQ9	A0A0Q3H264	A0A0Q3GFQ9	A0A0Q3H264	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.438