Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3G293Mitogen-activated protein kinase. (608 aa)    
Predicted Functional Partners:
I1HZJ6_BRADI
Uncharacterized protein.
   
 0.841
I1GPP8_BRADI
WD_REPEATS_REGION domain-containing protein.
   
 0.710
I1HAQ8_BRADI
TYR_PHOSPHATASE_2 domain-containing protein.
   
 0.699
I1I6R1_BRADI
Tyrosine-protein phosphatase domain-containing protein.
   
 0.699
UBQ10
Polyubiquitin 10.
    
 0.657
A0A0Q3NCL4
Uncharacterized protein.
   
 0.647
A0A2K2D4H7
Uncharacterized protein.
   
 0.647
A0A2K2D708
Uncharacterized protein.
   
 0.647
A0A2K2DBK6
Uncharacterized protein.
   
 0.647
I1H2F1_BRADI
PMEI domain-containing protein.
   
 0.647
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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