STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3GLR8C2H2-type domain-containing protein. (527 aa)    
Predicted Functional Partners:
I1I9M8_BRADI
Uncharacterized protein.
    
 0.607
I1H1X2_BRADI
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
    
 
 0.517
I1J3L9_BRADI
Protein kinase domain-containing protein.
   
 0.513
I1HDC6_BRADI
Uncharacterized protein.
    
  0.479
I1HVZ5_BRADI
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.471
A0A0Q3F216
Peptidylprolyl isomerase.
    
 
 0.470
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
  0.470
I1H2S7_BRADI
Uncharacterized protein.
    
  0.470
I1HZV5_BRADI
MRP-S28 domain-containing protein.
    
  0.470
A0A0Q3L671
Uncharacterized protein.
    
 0.456
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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