STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3GPP4Malate dehydrogenase. (359 aa)    
Predicted Functional Partners:
I1HZ21_BRADI
Citrate synthase.
  
 0.994
I1HYA2_BRADI
Citrate synthase; Belongs to the citrate synthase family.
  
 0.992
I1H5P4_BRADI
Uncharacterized protein.
  
 0.980
A0A0Q3H4R2
Malate synthase; Belongs to the malate synthase family.
   
 0.970
A0A0Q3FCD9
Malic enzyme.
  
 0.953
I1GU84_BRADI
Malic enzyme.
  
 0.953
A0A0Q3F8U6
Uncharacterized protein.
   
 
 0.949
I1H648_BRADI
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.924
I1HET7_BRADI
Ligase_CoA domain-containing protein.
  
 0.924
I1IHE7_BRADI
Uncharacterized protein.
  
 0.924
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.