STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3GR11Uncharacterized protein. (1150 aa)    
Predicted Functional Partners:
I1H5H5_BRADI
Nuclear pore protein.
   
 0.939
A0A0Q3F365
Uncharacterized protein.
   
 0.937
I1H7X7_BRADI
Uncharacterized protein.
   
 0.936
I1H272_BRADI
Nup54 domain-containing protein.
   
 0.932
I1HPH4_BRADI
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.927
I1HX48_BRADI
DUF5311 domain-containing protein.
   
 0.913
A0A2K2CIF0
Uncharacterized protein.
    
 0.892
A0A0Q3EMK0
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.864
I1HRH4_BRADI
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.859
I1I3L4_BRADI
Uncharacterized protein.
   
 0.856
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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