STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3GWJ1Uncharacterized protein. (254 aa)    
Predicted Functional Partners:
A0A2K2D715
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
     
 0.827
I1GSL1_BRADI
Uncharacterized protein.
   
 
 0.786
I1H4L2_BRADI
Uncharacterized protein.
   
 
 0.786
I1I059_BRADI
Uncharacterized protein.
   
 
 0.786
I1I9T5_BRADI
Uncharacterized protein.
   
 
 0.786
I1IWV2_BRADI
Uncharacterized protein.
   
 
 0.786
I1IZJ6_BRADI
Uncharacterized protein.
   
 
 0.786
I1HQE8_BRADI
Uncharacterized protein.
    
 0.589
I1GU88_BRADI
Helicase ATP-binding domain-containing protein.
    
   0.548
A0A0Q3H6C4
Uncharacterized protein.
    
 
 0.545
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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