STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3HH48TTF-type domain-containing protein. (678 aa)    
Predicted Functional Partners:
I1ISY5_BRADI
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 
 0.577
I1H097_BRADI
Uncharacterized protein.
      
 0.572
I1HKS8_BRADI
Uncharacterized protein.
      
 0.572
A0A0Q3L2U1
PHD-type domain-containing protein.
    
 0.520
A0A0Q3PCD5
Uncharacterized protein.
    
 0.520
I1I6D1_BRADI
Uncharacterized protein.
    
 0.520
A0A2K2D7G0
TTF-type domain-containing protein.
  
     0.503
A0A2K2CYP1
TTF-type domain-containing protein.
  
     0.483
A0A2K2DS19
Uncharacterized protein.
   
 0.440
I1H7V3_BRADI
GLOBIN domain-containing protein; Belongs to the globin family.
   
 0.440
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.