STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3JB67Senescence domain-containing protein. (368 aa)    
Predicted Functional Partners:
A0A0Q3MKT6
Uncharacterized protein.
  
     0.505
I1HL89_BRADI
Uncharacterized protein.
  
     0.500
I1J1T9_BRADI
Uncharacterized protein.
  
     0.496
I1ILG9_BRADI
Uncharacterized protein.
  
     0.483
I1H191_BRADI
Uncharacterized protein.
  
     0.482
A0A0Q3H950
F-box domain-containing protein.
  
     0.474
A0A0Q3FT08
Uncharacterized protein.
  
     0.472
I1IQD4_BRADI
Uncharacterized protein.
  
     0.467
I1I7L0_BRADI
Uncharacterized protein.
  
     0.462
A0A0Q3H701
MACPF domain-containing protein.
  
     0.459
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.