A0A0Q3JBQ6 protein (Brachypodium distachyon)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0Q3JBQ6

Uncharacterized protein. (193 aa)

Predicted Functional Partners:

I1GP32_BRADI

0.630

A0A0Q3IKY2

0.611

A0A0Q3JUG6

0.611

I1GZ85_BRADI

0.580

I1J2Z4_BRADI

0.554

I1HGS9_BRADI

0.542

A0A0Q3G8C3

0.539

I1I9X5_BRADI

0.539

A0A0Q3G6Q1

0.538

A0A0Q3IAZ3

0.538

Your Current Organism:

Brachypodium distachyon

NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0Q3G6Q1	A0A0Q3G8C3	A0A0Q3G6Q1	A0A0Q3G8C3	Glyco_hydro_35 domain-containing protein.	MADS-box domain-containing protein.	0.541
A0A0Q3G6Q1	A0A0Q3IAZ3	A0A0Q3G6Q1	A0A0Q3IAZ3	Glyco_hydro_35 domain-containing protein.	Uncharacterized protein.	0.542
A0A0Q3G6Q1	A0A0Q3JBQ6	A0A0Q3G6Q1	A0A0Q3JBQ6	Glyco_hydro_35 domain-containing protein.	Uncharacterized protein.	0.538
A0A0Q3G6Q1	I1HGS9_BRADI	A0A0Q3G6Q1	I1HGS9	Glyco_hydro_35 domain-containing protein.	AAI domain-containing protein.	0.515
A0A0Q3G6Q1	I1I9X5_BRADI	A0A0Q3G6Q1	I1I9X5	Glyco_hydro_35 domain-containing protein.	Uncharacterized protein.	0.544
A0A0Q3G6Q1	I1J2Z4_BRADI	A0A0Q3G6Q1	I1J2Z4	Glyco_hydro_35 domain-containing protein.	AAI domain-containing protein.	0.527
A0A0Q3G8C3	A0A0Q3G6Q1	A0A0Q3G8C3	A0A0Q3G6Q1	MADS-box domain-containing protein.	Glyco_hydro_35 domain-containing protein.	0.541
A0A0Q3G8C3	A0A0Q3IAZ3	A0A0Q3G8C3	A0A0Q3IAZ3	MADS-box domain-containing protein.	Uncharacterized protein.	0.537
A0A0Q3G8C3	A0A0Q3JBQ6	A0A0Q3G8C3	A0A0Q3JBQ6	MADS-box domain-containing protein.	Uncharacterized protein.	0.539
A0A0Q3G8C3	I1HGS9_BRADI	A0A0Q3G8C3	I1HGS9	MADS-box domain-containing protein.	AAI domain-containing protein.	0.529
A0A0Q3G8C3	I1I9X5_BRADI	A0A0Q3G8C3	I1I9X5	MADS-box domain-containing protein.	Uncharacterized protein.	0.539
A0A0Q3G8C3	I1J2Z4_BRADI	A0A0Q3G8C3	I1J2Z4	MADS-box domain-containing protein.	AAI domain-containing protein.	0.534
A0A0Q3IAZ3	A0A0Q3G6Q1	A0A0Q3IAZ3	A0A0Q3G6Q1	Uncharacterized protein.	Glyco_hydro_35 domain-containing protein.	0.542
A0A0Q3IAZ3	A0A0Q3G8C3	A0A0Q3IAZ3	A0A0Q3G8C3	Uncharacterized protein.	MADS-box domain-containing protein.	0.537
A0A0Q3IAZ3	A0A0Q3JBQ6	A0A0Q3IAZ3	A0A0Q3JBQ6	Uncharacterized protein.	Uncharacterized protein.	0.538
A0A0Q3IAZ3	I1HGS9_BRADI	A0A0Q3IAZ3	I1HGS9	Uncharacterized protein.	AAI domain-containing protein.	0.520
A0A0Q3IAZ3	I1I9X5_BRADI	A0A0Q3IAZ3	I1I9X5	Uncharacterized protein.	Uncharacterized protein.	0.542
A0A0Q3IAZ3	I1J2Z4_BRADI	A0A0Q3IAZ3	I1J2Z4	Uncharacterized protein.	AAI domain-containing protein.	0.534
A0A0Q3IKY2	A0A0Q3JBQ6	A0A0Q3IKY2	A0A0Q3JBQ6	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.611
A0A0Q3IKY2	I1GP32_BRADI	A0A0Q3IKY2	I1GP32	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Protein kinase domain-containing protein.	0.634