Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3JBX2Uncharacterized protein. (248 aa)    
Predicted Functional Partners:
I1IXV8_BRADI
Uncharacterized protein.
   
   0.897
I1HEG5_BRADI
Uncharacterized protein.
   
 
 0.716
A0A0Q3H9N5
4Fe-4S ferredoxin-type domain-containing protein.
      
 0.685
I1HEU7_BRADI
Uncharacterized protein.
   
  
 0.669
A0A0Q3MCB5
TCP domain-containing protein.
    
   0.660
A0A2K2DPG4
TCP domain-containing protein.
    
   0.660
I1GV30_BRADI
Uncharacterized protein.
      
 0.645
I1H783_BRADI
Importin N-terminal domain-containing protein.
      
 0.645
I1I8F3_BRADI
LRRNT_2 domain-containing protein.
     
 0.631
I1HH00_BRADI
Uncharacterized protein.
   
  
 0.616
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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