STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3JNS6Phenylalanine ammonia-lyase. (716 aa)    
Predicted Functional Partners:
I1ID33_BRADI
Aminotran_1_2 domain-containing protein.
    
 0.933
I1HXV5_BRADI
Uncharacterized protein.
  
 
 0.888
I1I7J1_BRADI
Uncharacterized protein.
  
 
 0.888
I1ICU8_BRADI
Uncharacterized protein.
  
 
 0.887
A0A2K2D124
Uncharacterized protein.
    
 0.874
I1H9M3_BRADI
Uncharacterized protein.
    
 0.868
I1I2A9_BRADI
Uncharacterized protein.
  
 
 0.866
I1IWK7_BRADI
Uncharacterized protein.
    
 0.862
I1HUA9_BRADI
Uncharacterized protein.
    
 0.854
I1GVQ1_BRADI
Uncharacterized protein.
  
 
 0.849
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.