STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3K027Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
A0A0Q3JEF2
Uncharacterized protein.
  
     0.527
I1IUF5_BRADI
Uncharacterized protein.
  
     0.515
A0A2K2CT49
Uncharacterized protein.
  
     0.509
I1HDH0_BRADI
OVATE domain-containing protein.
  
     0.505
A0A0Q3HJJ3
Uncharacterized protein.
  
     0.502
A0A2K2DSI7
BHLH domain-containing protein.
  
     0.496
I1IHQ8_BRADI
Uncharacterized protein.
  
     0.490
I1IBY8_BRADI
CBS domain-containing protein.
  
     0.489
A0A2K2D0Y1
Uncharacterized protein.
  
     0.487
A0A0Q3G2H7
DUF569 domain-containing protein.
  
     0.486
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.