STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0Q3RH11Remorin_C domain-containing protein. (315 aa)    
Predicted Functional Partners:
A0A0Q3N0F8
Uncharacterized protein.
  
 0.883
I1H3B1_BRADI
GalP_UDP_transf domain-containing protein.
  
 0.883
I1H081_BRADI
NAD(P)-bd_dom domain-containing protein.
  
 0.628
I1H3Y0_BRADI
NAD(P)-bd_dom domain-containing protein.
  
 0.628
I1H7F4_BRADI
Epimerase domain-containing protein.
  
 0.628
I1HFQ6_BRADI
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.628
I1HJY1_BRADI
Epimerase domain-containing protein.
  
 0.628
I1I0P0_BRADI
NAD(P)-bd_dom domain-containing protein.
  
 0.628
I1I6H2_BRADI
Epimerase domain-containing protein.
  
 0.628
I1I6T1_BRADI
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.628
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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