STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2CH89Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
I1I6Z0_BRADI
RRM domain-containing protein.
   
 
 0.989
I1H5T4_BRADI
Bms1-type G domain-containing protein.
   
 0.987
A0A0Q3EXG1
Uncharacterized protein.
   
 0.986
I1HHI5_BRADI
WD_REPEATS_REGION domain-containing protein.
   
 0.986
I1GSM6_BRADI
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 
 0.984
I1GLU2_BRADI
Uncharacterized protein.
   
 
 0.983
I1J2T7_BRADI
Uncharacterized protein.
   
 
 0.983
I1GVG5_BRADI
WD_REPEATS_REGION domain-containing protein.
   
 0.979
I1H9N1_BRADI
WD_REPEATS_REGION domain-containing protein.
   
 0.978
I1HH75_BRADI
WD_REPEATS_REGION domain-containing protein.
   
 0.978
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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