STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2DKC2Uncharacterized protein. (188 aa)    
Predicted Functional Partners:
A0A0Q3FQT8
Peptidase C50 domain-containing protein.
   
 
 0.786
I1GP32_BRADI
Protein kinase domain-containing protein.
   
  
 0.622
I1IZ16_BRADI
HORMA domain-containing protein.
   
 
 0.573
A0A0Q3FG49
Uncharacterized protein.
   
  
 0.512
A0A0Q3FWZ0
Uncharacterized protein.
   
  
 0.512
A0A0Q3IDA1
Uncharacterized protein.
   
  
 0.512
A0A0Q3GYZ2
Uncharacterized protein.
   
 
 0.507
A0A0Q3J2D7
BUB1 N-terminal domain-containing protein.
   
 
 0.507
I1HY90_BRADI
BUB1 N-terminal domain-containing protein.
   
 
 0.507
I1HUC2_BRADI
Structural maintenance of chromosomes protein.
   
    0.487
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.