STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2K2DKT6Ubiquitin-like domain-containing protein. (295 aa)    
Predicted Functional Partners:
I1ILN8_BRADI
ThiF domain-containing protein.
   
 0.912
I1GSW3_BRADI
SUMO-activating enzyme subunit; Belongs to the ubiquitin-activating E1 family.
   
 0.895
I1HAC9_BRADI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.814
I1I5P9_BRADI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.814
I1J0W6_BRADI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.814
A0A2K2CXB5
WPP domain-containing protein.
    
 0.791
I1I783_BRADI
WPP domain-containing protein.
    
 0.791
A0A0Q3FYT1
SMC_N domain-containing protein.
   
 0.758
A0A0Q3PTA6
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.720
A0A2K2CTI5
PCNA_C domain-containing protein.
   
 0.720
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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