STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1GQC4_BRADICyclin N-terminal domain-containing protein; Belongs to the cyclin family. (368 aa)    
Predicted Functional Partners:
I1H9S3_BRADI
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
   
 0.888
A0A2K2DG26
Cdc6_C domain-containing protein.
   
 0.837
A0A0Q3F0Q7
Protein kinase domain-containing protein.
   
 0.790
I1H088_BRADI
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
 0.757
I1IFL3_BRADI
Uncharacterized protein.
    
 0.754
I1GT26_BRADI
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.746
I1J347_BRADI
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.746
A0A0Q3MR61
APC1_C domain-containing protein.
    
 0.741
I1IZ16_BRADI
HORMA domain-containing protein.
   
 
 0.729
I1I4Y9_BRADI
CDT1 domain-containing protein.
   
 0.728
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.