STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1GR23_BRADINAC domain-containing protein. (375 aa)    
Predicted Functional Partners:
A0A0Q3IMA3
Uncharacterized protein.
  
     0.533
A0A2K2DJ53
Auxin_resp domain-containing protein.
  
     0.531
A0A0Q3MU02
Neprosin domain-containing protein.
  
     0.528
A0A2K2DJ58
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.527
I1HS25_BRADI
F-box domain-containing protein.
  
     0.525
I1J3V1_BRADI
Methyltransferase.
  
     0.525
A0A2K2CLH1
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.524
A0A2K2CLI1
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.524
A0A2K2DBH4
GATA-type domain-containing protein.
  
     0.524
A0A2K2DTA0
Uncharacterized protein.
  
     0.524
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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