STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1GX95_BRADIUncharacterized protein. (552 aa)    
Predicted Functional Partners:
I1IFL4_BRADI
RIC1 domain-containing protein.
    
 0.981
A0A2K2DUP0
Uncharacterized protein.
    
 0.765
I1GU86_BRADI
Uncharacterized protein.
    
 0.765
I1HUD2_BRADI
Vps53_N domain-containing protein.
     
 0.736
I1IWB3_BRADI
Vps54 domain-containing protein.
     
 0.720
A0A0Q3NYI4
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.700
A0A2K2D000
Uncharacterized protein.
     
 0.687
I1H4K8_BRADI
Uncharacterized protein.
     
 0.687
I1H1H1_BRADI
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.671
I1GNJ3_BRADI
Uncharacterized protein.
   
 
 0.659
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.