STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1GY05_BRADIUncharacterized protein. (194 aa)    
Predicted Functional Partners:
I1GRG7_BRADI
Nop domain-containing protein.
   
 
 0.564
I1GVZ8_BRADI
Nop domain-containing protein.
   
 
 0.564
I1GVX9_BRADI
Uncharacterized protein.
   
 
 0.538
I1IE34_BRADI
Uncharacterized protein.
   
 
 0.538
I1I241_BRADI
Uncharacterized protein.
  
     0.505
A0A2K2CP63
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.495
I1IFN2_BRADI
Uncharacterized protein.
  
     0.495
A0A2K2CSW0
Uncharacterized protein.
  
     0.480
I1IY49_BRADI
C2H2-type domain-containing protein.
  
     0.478
A0A0Q3NIH4
Fibronectin type-III domain-containing protein.
  
     0.472
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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