STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1H8Z6_BRADIUncharacterized protein. (572 aa)    
Predicted Functional Partners:
A0A2K2DUN1
AAI domain-containing protein; Belongs to the plant LTP family.
  
     0.472
I1GMI1_BRADI
PORR domain-containing protein.
  
     0.465
A0A0Q3ENI2
Remorin_C domain-containing protein.
  
     0.462
I1HK65_BRADI
Uncharacterized protein.
  
     0.462
I1HE54_BRADI
RING-type domain-containing protein.
  
     0.449
I1HQ90_BRADI
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).
  
     0.448
A0A0Q3GH41
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.447
I1HE56_BRADI
NAC domain-containing protein.
  
     0.446
I1HGB6_BRADI
Uncharacterized protein.
  
     0.427
I1GKW3_BRADI
AvrRpt-cleavage domain-containing protein.
  
     0.419
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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