STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1HDP9_BRADIBeta-amylase. (556 aa)    
Predicted Functional Partners:
A0A0Q3GVX8
4-alpha-glucanotransferase.
     
 0.926
I1GRF8_BRADI
Uncharacterized protein.
     
 0.923
A0A0Q3JH50
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.900
A0A2K2D9A2
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.900
A0A0Q3HAX8
Aamy domain-containing protein.
     
 0.720
I1HQX9_BRADI
Uncharacterized protein.
     
 0.713
I1IXB3_BRADI
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.712
I1HTF8_BRADI
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.691
I1I8M0_BRADI
Aamy domain-containing protein.
     
 0.688
A0A0Q3QZ14
Aamy domain-containing protein.
     
 0.687
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.