STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1HE64_BRADIPeroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. (343 aa)    
Predicted Functional Partners:
A0A0Q3FH21
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
  0.650
A0A2K2CYW7
PKS_ER domain-containing protein.
     
  0.650
CAD5
Cinnamyl alcohol dehydrogenase 5.
     
  0.650
I1I1X8_BRADI
PKS_ER domain-containing protein.
     
  0.650
I1IWI1_BRADI
PKS_ER domain-containing protein.
     
  0.650
I1ILU4_BRADI
Uncharacterized protein; Belongs to the plant dehydrin family.
      
 0.572
I1J267_BRADI
Epimerase domain-containing protein.
      
 0.570
I1J269_BRADI
Epimerase domain-containing protein.
      
 0.570
I1J271_BRADI
Epimerase domain-containing protein.
      
 0.570
A0A0Q3SBF3
Uncharacterized protein.
      
 0.519
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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