STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1HQB2_BRADITubby-like F-box protein; Belongs to the TUB family. (360 aa)    
Predicted Functional Partners:
I1HAA5_BRADI
CNNM transmembrane domain-containing protein.
   
  
 0.717
A0A2K2D9F9
Folate gamma-glutamyl hydrolase.
      
 0.714
I1HL15_BRADI
Uncharacterized protein.
   
  
 0.572
A0A0Q3FRE1
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.571
A0A0Q3HEU3
WW domain-containing protein.
      
 0.571
A0A0Q3S289
Uncharacterized protein.
      
 0.571
I1GVG9_BRADI
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.571
I1H356_BRADI
Uncharacterized protein.
      
 0.571
I1IKT6_BRADI
Uncharacterized protein.
      
 0.571
A0A0Q3KNV5
Uncharacterized protein; Belongs to the synaptobrevin family.
      
 0.570
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.