STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1HWI4_BRADIUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (149 aa)    
Predicted Functional Partners:
A0A0Q3MQ29
Uncharacterized protein.
    
 0.845
A0A2K2DCG2
HECT domain-containing protein.
    
 0.845
I1HIM2_BRADI
HECT domain-containing protein.
    
 0.845
A0A0Q3EZ89
HECT domain-containing protein.
    
 0.839
A0A0Q3H1P2
HECT domain-containing protein.
    
 0.839
I1HJU4_BRADI
Uncharacterized protein.
    
 0.837
I1IPR5_BRADI
RING-type domain-containing protein.
   
 0.732
I1I4J7_BRADI
Peroxisome biogenesis protein 12; Required for peroxisome biogenesis and for PTS1- and PTS2- dependent protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.711
I1IBP2_BRADI
Uncharacterized protein.
    
 0.707
I1IFL3_BRADI
Uncharacterized protein.
    
 0.696
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.