STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1HY09_BRADIUncharacterized protein. (486 aa)    
Predicted Functional Partners:
I1GT87_BRADI
Uncharacterized protein.
    
  0.671
I1HF29_BRADI
Ubiquitin-like domain-containing protein.
    
  0.603
I1HLI1_BRADI
Ubiquitin-like domain-containing protein.
    
  0.603
I1I505_BRADI
Ubiquitin-like domain-containing protein.
    
  0.603
I1HSG5_BRADI
Uncharacterized protein.
      
 0.543
A0A0Q3GRJ8
Uncharacterized protein.
      
 0.540
I1GNX8_BRADI
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region.
      
 0.540
I1GVS4_BRADI
Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family.
      
 0.497
I1II80_BRADI
Uncharacterized protein; Belongs to the cyclin family.
      
 0.497
A0A0Q3GJZ7
MSP domain-containing protein.
      
 0.495
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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