STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1I153_BRADIUncharacterized protein. (437 aa)    
Predicted Functional Partners:
I1IZ35_BRADI
Uncharacterized protein.
      
 0.554
I1I371_BRADI
Uncharacterized protein.
 
   
0.534
A0A2K2D604
TCP domain-containing protein.
  
     0.481
I1IEH4_BRADI
Uncharacterized protein.
  
     0.479
A0A0Q3F561
KH domain-containing protein.
      
 0.477
I1GMI1_BRADI
PORR domain-containing protein.
      
 0.475
I1HTX6_BRADI
Uncharacterized protein.
      
 0.470
A0A0Q3NP53
Uncharacterized protein.
  
     0.467
A0A0Q3HFE8
NAC domain-containing protein.
  
     0.459
I1GYX8_BRADI
Uncharacterized protein.
  
     0.458
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.