STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1I1W7_BRADIUncharacterized protein. (118 aa)    
Predicted Functional Partners:
I1IT16_BRADI
CBFD_NFYB_HMF domain-containing protein.
    
 0.787
A0A2K2CVY0
BRCT domain-containing protein.
    
 
 0.614
A0A0Q3IP04
LOB domain-containing protein.
  
 
   0.548
A0A0Q3G9Z6
LOB domain-containing protein.
  
    0.543
I1H9Q0_BRADI
LOB domain-containing protein.
  
 
   0.543
A0A2K2DCU8
Uncharacterized protein.
  
     0.542
I1HSY4_BRADI
LOB domain-containing protein.
  
    0.542
I1INP4_BRADI
ZF-HD dimerization-type domain-containing protein.
  
     0.542
A0A0Q3EPZ9
ZF-HD dimerization-type domain-containing protein.
  
     0.541
A0A2K2CXF0
X8 domain-containing protein.
  
     0.540
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.