STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1I5Y1_BRADILEA_2 domain-containing protein. (220 aa)    
Predicted Functional Partners:
I1HCY6_BRADI
LEA_2 domain-containing protein.
  
     0.508
A0A0Q3IMW7
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.498
I1I359_BRADI
Cupin_3 domain-containing protein.
  
     0.492
I1HYY2_BRADI
Uncharacterized protein.
  
     0.488
A0A0Q3FHN2
Uncharacterized protein.
  
     0.485
I1GMX9_BRADI
Uncharacterized protein.
  
     0.468
I1HCL6_BRADI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.465
I1J121_BRADI
FLZ-type domain-containing protein.
  
     0.460
A0A0Q3GPA3
TCP domain-containing protein.
  
   
 0.451
I1HDJ6_BRADI
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
  
     0.448
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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