STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1I8E4_BRADIUncharacterized protein. (559 aa)    
Predicted Functional Partners:
A0A0Q3H4R2
Malate synthase; Belongs to the malate synthase family.
   
  
 0.733
I1H8L0_BRADI
Uncharacterized protein.
      
 0.687
A0A0Q3H091
Uncharacterized protein.
      
 0.637
A0A0Q3JDP8
Uncharacterized protein.
      
 0.637
A0A0Q3QUG4
Uncharacterized protein.
      
 0.637
I1GU52_BRADI
Uncharacterized protein.
      
 0.637
I1HGV3_BRADI
TFIIB-type domain-containing protein.
      
 0.637
I1IS80_BRADI
TFIIB-type domain-containing protein.
      
 0.637
A0A0Q3F6L1
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.585
I1HA00_BRADI
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.585
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.