STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1IH50_BRADIAlkyl transferase; Belongs to the UPP synthase family. (318 aa)    
Predicted Functional Partners:
A0A0Q3HKL5
Uncharacterized protein.
   
 0.860
A0A0Q3SDR9
Uncharacterized protein.
   
 0.860
A0A0Q3HJQ4
Uncharacterized protein.
     
 0.636
A0A0Q3G4K6
Nudix hydrolase domain-containing protein.
  
 
 0.635
I1GTN8_BRADI
Nudix hydrolase domain-containing protein.
  
 
 0.635
A0A0Q3N4T0
AA_kinase domain-containing protein.
  
 
 0.597
I1IXE0_BRADI
AA_kinase domain-containing protein.
  
 
 0.597
I1H3G0_BRADI
AA_TRNA_LIGASE_II domain-containing protein.
  
    0.595
I1IIK4_BRADI
AA_TRNA_LIGASE_II domain-containing protein.
  
    0.595
A0A0Q3EA47
Uncharacterized protein.
  
  
 0.586
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.