STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1IR95_BRADIUncharacterized protein. (608 aa)    
Predicted Functional Partners:
I1IIS4_BRADI
Uncharacterized protein.
     
 0.926
C3SAA8_BRADI
EIN3-binding F-box protein.
     
 0.906
I1HYG9_BRADI
Uncharacterized protein.
     
 0.906
MPK6
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.900
MPK3
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
     
  0.900
A0A0Q3GLJ9
AP2/ERF domain-containing protein.
     
 0.686
A0A0Q3EVS8
AP2/ERF domain-containing protein.
     
 0.677
A0A0Q3J920
AP2/ERF domain-containing protein.
     
  0.650
A0A2K2CX69
AP2/ERF domain-containing protein.
     
  0.650
I1HEX0_BRADI
Uncharacterized protein.
  
   
 0.567
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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