STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1IRL4_BRADIHORMA domain-containing protein. (604 aa)    
Predicted Functional Partners:
I1HBV8_BRADI
WD_REPEATS_REGION domain-containing protein.
      
 0.697
I1IYV6_BRADI
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.649
A0A0Q3IRG6
RECA_2 domain-containing protein.
   
 
 0.599
A0A0Q3LIE5
Uncharacterized protein; Belongs to the RecA family.
   
 
 0.599
I1HUL5_BRADI
Small ubiquitin-related modifier.
      
 0.577
I1GUD4_BRADI
Uncharacterized protein.
   
  
 0.565
A0A0Q3H8L1
Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.
    
 
 0.552
A0A0Q3GIN4
Uncharacterized protein.
   
 
 0.543
A0A0Q3QJK7
Uncharacterized protein.
      
 0.502
A0A0Q3FQT8
Peptidase C50 domain-containing protein.
   
  
 0.495
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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