STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1IYZ7_BRADIDUF4110 domain-containing protein. (668 aa)    
Predicted Functional Partners:
I1IB77_BRADI
CBF domain-containing protein.
   
    0.596
A0A0Q3N7L1
Uncharacterized protein.
   
    0.582
I1HSE3_BRADI
KH domain-containing protein.
    
   0.574
A0A0Q3Q0E9
Uncharacterized protein.
   
    0.567
I1H4E8_BRADI
Uncharacterized protein.
   
    0.567
I1H5T4_BRADI
Bms1-type G domain-containing protein.
   
    0.563
I1HHI5_BRADI
WD_REPEATS_REGION domain-containing protein.
   
    0.521
I1IEX9_BRADI
Uncharacterized protein.
      
 0.513
I1HFR9_BRADI
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.476
I1GTT2_BRADI
NUC153 domain-containing protein.
   
    0.473
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.