STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1J1Q3_BRADIUncharacterized protein. (361 aa)    
Predicted Functional Partners:
I1HQE0_BRADI
Uncharacterized protein.
  
 
 0.988
A0A2K2D782
Uncharacterized protein.
   
 
 0.977
I1GRV5_BRADI
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
  
 
 0.977
I1HAB3_BRADI
Uncharacterized protein.
   
 
 0.977
I1HEL2_BRADI
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
  
 
 0.977
I1IKC7_BRADI
Ribosomal_L18_c domain-containing protein.
   
 
 0.977
I1GLQ1_BRADI
TRASH domain-containing protein.
  
 
 0.976
I1HSS3_BRADI
TRASH domain-containing protein.
  
 
 0.976
I1I840_BRADI
TRASH domain-containing protein.
  
 
 0.976
I1IE97_BRADI
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 
 0.976
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.