STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1J2F6_BRADIDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1236 aa)    
Predicted Functional Partners:
I1IIS1_BRADI
RPOLD domain-containing protein.
  
 0.966
I1GQJ3_BRADI
Uncharacterized protein.
  
 0.928
I1IAK6_BRADI
Uncharacterized protein.
  
 0.928
I1HWD6_BRADI
RPOL4c domain-containing protein.
    
 0.927
I1H2S9_BRADI
RNA_pol_L_2 domain-containing protein.
   
 0.909
I1IRC8_BRADI
RNA_pol_L_2 domain-containing protein.
   
 0.909
I1GQN8_BRADI
RPOLD domain-containing protein.
  
 0.897
A0A0Q3FHT3
Uncharacterized protein.
   
 0.894
A0A2K2DVU5
TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.894
I1GS55_BRADI
TFIIS-type domain-containing protein.
   
 0.894
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.