STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I1J2P3_BRADIUncharacterized protein. (335 aa)    
Predicted Functional Partners:
A0A2K2D9P1
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.952
I1H6K4_BRADI
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.952
I1IV86_BRADI
Asparagine synthetase [glutamine-hydrolyzing].
     
 0.952
I1HRT4_BRADI
Aspartate aminotransferase.
   
 
 0.915
I1GY46_BRADI
Aspartate aminotransferase.
   
 
 0.914
I1HZ43_BRADI
Aspartate aminotransferase.
   
 
 0.914
I1IDH8_BRADI
Aminotran_1_2 domain-containing protein.
   
 
 0.914
I1I2B2_BRADI
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
    
 0.913
A0A0Q3J734
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.907
I1H951_BRADI
Adenylosuccinate synthetase, chloroplastic; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.907
Your Current Organism:
Brachypodium distachyon
NCBI taxonomy Id: 15368
Other names: B. distachyon, Brachypodium distachyon (L.) P.Beauv., annual false brome, false brome, purple false brome, stiff brome
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