STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_104O-methyltransferase family 3. (213 aa)    
Predicted Functional Partners:
MYP_864
Short-chain dehydrogenase.
 
      0.873
MYP_2408
Short-chain dehydrogenase/reductase SDR.
 
      0.848
MYP_60
3-oxoacyl-ACP synthase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
      0.841
MYP_3899
Dehydrogenase.
 
      0.836
MYP_103
Peptidase M16 domain protein.
  
    0.799
MYP_105
Hypothetical protein.
       0.784
MYP_3779
Hypothetical protein.
  
 0.783
MYP_400
Non-ribosomal peptide synthetase module containing protein.
   
 0.780
MYP_3727
Hypothetical protein.
 
      0.719
MYP_4250
Hypothetical protein.
 
      0.700
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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