STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1193Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1148 aa)    
Predicted Functional Partners:
MYP_4775
methylmalonyl-CoA carboxyltransferase.
 
 0.980
MYP_23
methylcrotonoyl-CoA carboxylase.
 
 0.974
MYP_1312
Hypothetical protein.
 
 0.948
MYP_3810
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.934
MYP_969
Malic enzyme.
   
 0.934
MYP_3779
Hypothetical protein.
   
 0.927
MYP_400
Non-ribosomal peptide synthetase module containing protein.
  
 0.925
MYP_4162
Carboxylesterase.
 
 
0.923
MYP_805
Citrate synthase; Belongs to the citrate synthase family.
  
 0.923
MYP_398
Beta-ketoacyl synthase.
   
 0.921
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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